CELLS - PEROXISOMES #19

Peroxisomes - Another Enzyme Package

There are many ways that peroxisomes are similar to lysosomes. They are small vesicles found around the cell. They have a single membrane that contains digestive enzymes for breaking down toxic materials in the cell. They differ from lysosomes in the type of enzyme they hold. Peroxisomes hold on to enzymes that require oxygen (oxidative enzymes). Lysosomes have enzymes that work in oxygen-poor areas and lower pH. 

Peroxisomes absorb nutrients that the cell has acquired. They are very well known for digesting fatty acids. They also play a part in the way organisms digest alcohol(ethanol). Because they do that job, you would expect liver cells to have more peroxisomes than most other cells in a human body. They also play a role in cholesterol synthesis and the digestion of amino acids. 

Creating Hydrogen Peroxide

Peroxisomes work in a very specific way. Their enzymes attack complex molecules and break them down into smaller molecules. One of the byproducts of the digestion is hydrogen peroxide (H₂O₂). Peroxisomes have developed to a point where they are able to contain that hydrogen peroxide and break it down into water (H₂O) and oxygen (O₂). The water is harmless to the cell and the oxygen can be used in the next digestive reaction. 

Mysteries of the Peroxisome

Peroxisomes have a single membrane that surrounds the digestive enzymes and dangerous byproducts of their work (hydrogen peroxide). The protein enzymes are usually created by lysosomes floating in the cell. They then insert the proteins into the peroxisome bubble. Peroxisomes continue to grow until they split in two. Where does the membrane come from? Scientists are still researching that answer. It may come from the endoplasmic reticulum, but it may be created in a way different from lysosomes. 

CELL ORGANELLES - QUIZ

CELLS - LYSOSOMES #18

Lysosomes - Little Enzyme Packages

You will find organelles called lysosomes in nearly every animal-like eukaryotic cell. Lysosomes hold enzymes that were created by the cell. The purpose of the lysosome is to digest things. They might be used to digest food or break down the cell when it dies. What creates a lysosome? You'll have to visit the Golgi complex for that answer. 

A lysosome is basically a specialized vesicle that holds a variety of enzymes. The enzyme proteins are first created in the rough endoplasmic reticulum. Those proteins are packaged in a vesicle and sent to the Golgi apparatus. The Golgi then does its final work to create the digestive enzymes and pinches off a small, very specific vesicle. That vesicle is a lysosome. From there the lysosomes float in the cytoplasm until they are needed. Lysosomes are single-membrane organelles. 

Lysosome Action

Since lysosomes are little digestion machines, they go to work when the cell absorbs or eats some food. Once the material is inside the cell, the lysosomes attach and release their enzymes. The enzymes break down complex molecules that can include complex sugars and proteins. But what if food is scarce and the cell is starving? The lysosomes go to work even if there is no food for the cell. When the signal is sent out, lysosomes will actually digest the cell organelles for nutrients. 

Why Don't They Digest the Cell?

Here's something scientists are still trying to figure out. If the lysosome holds many types of enzymes, how can the lysosome survive? Lysosomes are designed to break down complex molecules and pieces of the cell. Why don't the enzymes break down the membrane that surrounds the lysosome? 

CELLS - MICROTUBLES #17

Microtubules - Thick Protein Tubes

Microtubules are usually discussed with microfilaments. Although they are both proteins that help define cell structure and movement, they are very different molecules. While microfilaments are thin, microtubules are thick, strong spirals of thousands of subunits. Those subunits are made of the protein called tubulin. And yes, they got their name because they look like a tube. 

Elements of the Cytoskeleton

All of the microfilaments and microtubules combine to form the cytoskeleton of the cell. The cytoskeleton is different from cytoplasm (cytosol). The cytoskeleton provides structure. Cytoplasm is just a fluid. The cytoskeleton connects to every organelle and every part of the cell membrane. Think about an amoeba. All of the pieces work together so that the foot might reach out towards the food. Then lysosomes and peroxisomes are sent to begin digestion. The movement of the cell membrane, organelles, and cytoplasm is all related to the tubules and filaments. 

Moving Chromosomes

Microtubules have many more uses than just cell structure. They are also very important in cell division. They connect to chromosomes, help them with their first split, and then move to each new daughter cell. They are a part of a small pair of organelles called centrioles that have the specific purpose to help a cell divide. Once the cell has finished dividing, the microtubules are put to work in other places. 

Moving Organisms

Beyond the role they play in internal cell movement, microtubules also work together to form larger structures that work on the outside of the cells. They can combine in very specific arrangements to form cilia and flagella. Cilia are little hairs you might see on the outside of a paramecium or other protists. They flap back and forth to help the cell move. Flagella are long, thick tails. They whip around and sometimes twirl, pushing the cell along. 

CELLS - MICROFILAMENTS #16

Microfilaments - Stringy Proteins

You will find microfilaments in most cells. They are the partner of microtubules. They are long, thin, and stringy proteins (mainly actin) compared to the rounder, tube-shaped microtubules. We'd like to say you can find them here or there, but they are everywhere in a cell. They work with microtubules to form the structure that allows a cell to hold its shape, move itself, and move its organelles. 

Making the Cytoskeleton

All of the microfilaments and microtubules combine to form the cytoskeleton of the cell. The cytoskeleton is different from cytoplasm (cytosol). The cytoskeleton provides structure. Cytoplasm is just a fluid. The cytoskeleton connects to every organelle and every part of the cell membrane. Think about an amoeba. All of the pieces work together so that the foot might reach out towards the food. Then lysosomes and peroxisomes are sent to begin digestion. The movement of the cell membrane, organelles, and cytoplasm is all related to the tubules and filaments. 

You will also find many microfilaments in muscle tissue. They are called myofibrils when you find them in muscles. The two proteins myosin and actinwork together to help the muscle cells relax and contract. The two proteins need each other and together they are called actomyosin. Combine those protein threads with some ions in the muscle cell and you get a huge contraction. The groups of actomyosin contracting are called sarcomeres. All of the muscle cells work together to make a muscle contract. 

A Role in Cell Movement

Cells move in a variety of ways. We just talked about the contraction of a muscle cell. That is an extreme example. When you learn about single-celled organisms, you will understand that they need to move. They may need to glide from one area to another. The microfilaments are often found anchored to proteins in the cell membrane. Sometimes microfilaments are found floating free and connected to other filaments and tubules. Those binding proteins allow the microfilaments to push and pull on the cell membrane to help the cell move. 

CELLS - VACUOLES #15

Vacuoles - Storage Bins to the Cells

Vacuoles are storage bubbles found in cells. They are found in both animal and plant cells but are much larger in plant cells. Vacuoles might store food or any variety of nutrients a cell might need to survive. They can even store waste products so the rest of the cell is protected from contamination. Eventually, those waste products would be sent out of the cell. 

The structure of vacuoles is fairly simple. There is a membrane that surrounds a mass of fluid. In that fluid are nutrients or waste products. Plants may also use vacuoles to store water. Those tiny water bags help to support the plant. They are closely related to objects called vesicles that are found throughout the cell. 

In plant cells, the vacuoles are much larger than in animal cells. When a plant cell has stopped growing, there is usually one very large vacuole. Sometimes that vacuole can take up more than half of the cell's volume. The vacuole holds large amounts of water or food. Don't forge that vacuoles can also hold the plant waste products. Those waste products are slowly broken into small pieces that cannot hurt the cell. Vacuoles hold onto things that the cell might need, just like a backpack. 

Helping with Support

Vacuoles also play an important role in plant structure. Plants use cell walls to provide support and surround cells. The size of that cell may still increase or decrease depending on how much water is present. Plant cells do not shrink because of changes in the amount of cytoplasm. Most of a plant cell's volume depends on the material in vacuoles. 

Those vacuoles gain and lose water depending on how much water is available to the plant. A drooping plant has lost much of its water and the vacuoles are shrinking. It still maintains its basic structure because of the cell walls. When the plant finds a new source of water, the vacuoles are refilled and the plant regains its structure. 

CELLS - GOLGI APPARATUS #14

Golgi Apparatus - Packing Things Up

The Golgi apparatus or Golgi complex is found in most cells. It is another packaging organelle like the endoplasmic reticulum (ER). It was named after Camillo Golgi, an Italian biologist. It is pronounced GOL-JI in the same way you would say squee-gie, as soft a "G" sound. While layers of membranes may look like the rough ER, they have a very different function. 

Foundation of Vesicles

The Golgi complex gathers simple molecules and combines them to make molecules that are more complex. It then takes those big molecules, packages them in vesicles, and either stores them for later use or sends them out of the cell. It is also the organelle that builds lysosomes (cell digestion machines). Golgi complexes in the plant may also create complex sugars and send them off in secretory vesicles. The vesicles are created in the same way the ER does it. The vesicles are pinched off the membranes and float through the cell. 

The Golgi complex is a series of membranes shaped like pancakes. The single membrane is similar to the cell membrane in that it has two layers. The membrane surrounds an area of fluid where the complex molecules (proteins, sugars, enzymes) are stored and changed. Because the Golgi complex absorbs vesicles from the rough ER, you will also find ribosomes in those pancake stacks. 

Working with the Rough ER

The Golgi complex works closely with the rough ER. When a protein is made in the ER, something called a transition vesicle is made. This vesicle or sac floats through the cytoplasm to the Golgi apparatus and is absorbed. After the Golgi does its work on the molecules inside the sac, a secretory vesicle is created and released into the cytoplasm. From there, the vesicle moves to the cell membrane and the molecules are released out of the cell. 

BEING HUMAN

You have a new TAB to check out - BEING HUMAN.  This is a separate section in your notes. 

Read Information, Take Notes, Answer Questions.

How easy is that.  Weekly points will be earned by answering a few simple question from that week's BEING HUMAN topics.  You will turn in the answers to your questions in the drawer every Friday.

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CELLS - ENDOPLASMIC RETICULUM #13

Endoplasmic Reticulum - Wrapping it Up

Another organelle in the cell is the endoplasmic reticulum (ER). While the function of the nucleus is to act as the cell brain, the ER functions as a packaging system. It does not work alone. The ER works closely with the Golgi apparatus, ribososmes, RNA, mRNA, and tRNA. It creates a network of membranes found through the whole cell. The ER may also look different from cell to cell, depending on the cell's function. 

Rough and Smooth

As you learn more about cells you will discover two types of ER. There are rough ER and smooth ER. They both have the same types of membranes but they have different shapes and rough ER has ribosomes attached. Rough ER looks like sheets of bumpy membranes while smooth ER looks more like tubes. Sometimes the ER looks like a flat balloon. Sacs of the ER called cisternae store the complex molecules. 

Smooth ER has its purpose in the cell. It acts as a storage organelle. It is important in the creation and storage of steroids. It also stores ions in solution that the cell may need at a later time. Steroids are a type of ringed organic molecule used for many purposes in an organism. They are not always about building muscle mass like a weight lifter. The ion storage is important because sometimes a cell needs ions fast. It might not want to search the environment for ions, so it is easier to have them stored in a pack for easy use. 

Rough ER was mentioned in the section on ribosomes. They are very important in the synthesis and packaging of proteins. Some of those proteins might be used in the cell and some are sent out. The ribosomes are attached to the membrane of the ER. As the ribosome builds the amino acid chain, the chain is pushed into the ER. When the protein is complete, the rough ER pinches off a vesicle. That vesicle, a small membrane bubble, can move to the cell membrane or the Golgi apparatus. 

CELLS - CHLOROPLASTS #12

Chloroplasts - Show me the Green

Chloroplasts are the food producers of the cell. They are only found in plant cells and some protists. Animal cells do not have chloroplasts. Every greenplant you see is working to convert the energy of the sun into sugars. Plants are the basis of all life on Earth. They create sugars, and the byproduct of that process is the oxygen that we breathe. That process happens in the chloroplast. Mitochondria work in the opposite direction and break down the sugars and nutrients that the cell receives. 

Special Structures

We'll hit the high points for the structure of a chloroplast. Two membranes contain and protect the inner parts of the chloroplast. The stroma is an area inside of the chloroplast where reactions occur and starches (sugars) are created. Onethylakoid stack is called a granum. The thylakoids have chlorophyll molecules on their surface. That chlorophyll uses sunlight to create sugars. The stacks of sacs are connected by stromal lamellae. The lamellae act like the skeleton of the chloroplast, keeping all of the sacs a safe distance from each other and maximizing the efficiency of the organelle. 

Making Food

The purpose of the chloroplast is to make sugars and starches. They use a process called photosynthesis to get the job done. Photosynthesis is the process of a plant taking energy from the Sun and creating sugars. When the energy from the Sun hits a chloroplast, chlorophyll uses that energy to combine carbon dioxide (CO₂) and water (H₂O). The molecular reactions create sugar and oxygen (O₂). Plants and animals then use the sugars (glucose) for food and energy. Animals also use the oxygen to breathe. 

Different Chlorophyll Molecules

We said that chlorophyll molecules sit on the outside of the thylakoid sacs. Not all chlorophyll is the same. Three types of chlorophyll can complete photosynthesis. There are even molecules other than chlorophyll that are photosynthetic. One day you might hear about carotenoids, phycocyanin (bacteria), phycoerythrin (algae), andfucoxanthin (brown algae). While those compounds might complete photosynthesis, they are not all green or the same structure as chlorophyll. 

CHLOROPLAST - QUIZ

CELLS - MITOCHONDRIA #11

Mitochondria - Turning on the Powerhouse Mitochondria are known as the powerhouses of the cell. They are organelles that act like a digestive system that takes in nutrients, breaks them down, and creates energy for the cell. The process of creating cell energy is known as cellular respiration. Most of the chemical reactions involved in cellular respiration happen in the mitochondria. A mitochondrion is shaped perfectly to maximize its efforts. Mitochondria are very small organelles. You might find cells with several thousand mitochondria. The number depends on what the cell needs to do. If the purpose of the cell is to transmit nerve impulses, there will be fewer mitochondria than in a muscle cellthat needs loads of energy. If the cell feels it is not getting enough energy to survive, more mitochondria can be created. Sometimes they can even grow, move, and combine with other mitochondria, depending on the cell's needs. Mitochondria Structure Mitochondria have two membranes (not one as in other organelles). The outer membrane covers the organelle and contains it. The inner membrane folds over many times (cristae). That folding increases the surface area inside the organelle. Many of the chemical reactions happen on the inner membrane of the mitochondria. The increased surface area allows the small organelle to do as much work as possible. If you have more room to work, you can get more work done. Similar surface area strategies are used by microvilli in your intestinal cells. The fluid inside of the mitochondria is called the matrix. Using Oxygen to Release Energy How are mitochondria used in cellular respiration? The matrix is filled with water (H2O) and proteins (enzymes). Those proteins take food molecules and combine them with oxygen (O2). The mitochondria are the only place in the cell where oxygen can be combined with the food molecules. After the oxygen is added, the material can be digested. They are working organelles that keep the cell full of energy. A mitochondrion may also be involved in controlling the concentration of calcium (Ca) within the cell.  MITOCHONDRIA - QUIZ